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encyclopedia of Rare Disease Annotation for Precision Medicine



   fanconi syndrome
  

Disease ID 942
Disease fanconi syndrome
Definition
A hereditary or acquired form of generalized dysfunction of the PROXIMAL KIDNEY TUBULE without primary involvement of the KIDNEY GLOMERULUS. It is usually characterized by the tubular wasting of nutrients and salts (GLUCOSE; AMINO ACIDS; PHOSPHATES; and BICARBONATES) resulting in HYPOKALEMIA; ACIDOSIS; HYPERCALCIURIA; and PROTEINURIA.
Synonym
fanconi syndrome (disorder)
fanconi syndrome [disease/finding]
fanconi syndrome, nos
fanconi's syndrome
fanconis syndrome
lignac-fanconi syndrome
nephropathic cystinosis
proximal renal tubular dysfunction
syndrome, fanconi
DOID
UMLS
C0015624
MeSH
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:52)
C0029442  |  osteomalacia  |  6
C0010690  |  cystinosis  |  5
C0026764  |  multiple myeloma  |  4
C0162283  |  nephrogenic diabetes insipidus  |  4
C0011848  |  diabetes insipidus  |  4
C0035579  |  rickets  |  4
C0011847  |  diabetes  |  4
C0026764  |  myeloma  |  3
C0019158  |  hepatitis  |  3
C0019163  |  hepatitis b  |  3
C0027707  |  interstitial nephritis  |  2
C0039730  |  thalassemia  |  2
C0033687  |  proteinuria  |  2
C0027697  |  nephritis  |  2
C0042164  |  uveitis  |  2
C0035078  |  renal failure  |  2
C0024299  |  lymphoma  |  2
C1136085  |  monoclonal gammopathy  |  1
C0022658  |  nephropathy  |  1
C0042870  |  vitamin d defic  |  1
C0019829  |  hodgkin's lymphoma  |  1
C0878544  |  cardiomyopathy  |  1
C0024305  |  non-hodgkin's lymphoma  |  1
C0041349  |  tubulo-interstitial nephritis  |  1
C0023418  |  leukemia  |  1
C0001339  |  acute pancreatitis  |  1
C1704375  |  hypophosphatemic rickets  |  1
C1565489  |  renal insufficiency  |  1
C1527336  |  sjogren syndrome  |  1
C0022661  |  end stage renal failure  |  1
C0022661  |  chronic kidney disease  |  1
C0024419  |  waldenstrom macroglobulinemia  |  1
C0042373  |  vascular disease  |  1
C0027709  |  nephrocalcinosis  |  1
C0019569  |  hirschsprung's disease  |  1
C0024790  |  paroxysmal nocturnal hemoglobinuria  |  1
C0042870  |  vitamin d deficiency  |  1
C0028860  |  lowe's syndrome  |  1
C0023448  |  lymphocytic leukemia  |  1
C0024419  |  macroglobulinemia  |  1
C0020459  |  hyperinsulinism  |  1
C0022658  |  kidney disease  |  1
C0019202  |  wilson's disease  |  1
C0019618  |  histiocytosis  |  1
C0019048  |  hemoglobinuria  |  1
C0023434  |  chronic lymphocytic leukemia  |  1
C0036202  |  sarcoidosis  |  1
C0022660  |  acute renal failure  |  1
C1704375  |  hypophosphataemic rickets  |  1
C0030305  |  pancreatitis  |  1
C0041349  |  tubulointerstitial nephritis  |  1
C0023241  |  legionella pneumonia  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:4)
1497  |  CTNS  |  CTD_human;ORPHANET;UNIPROT
6514  |  SLC2A2  |  CTD_human
6569  |  SLC34A1  |  CTD_human
2878  |  GPX3  |  CTD_human
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:68)
10257  |  ABCC4  |  1.016  |  DISEASES
55811  |  ADCY10  |  2.334  |  DISEASES
204  |  AK2  |  2.16  |  DISEASES
205  |  AK4  |  2.29  |  DISEASES
210  |  ALAD  |  3.325  |  DISEASES
229  |  ALDOB  |  2.704  |  DISEASES
567  |  B2M  |  2.978  |  DISEASES
617  |  BCS1L  |  1.97  |  DISEASES
7809  |  BSND  |  1.652  |  DISEASES
837  |  CASP4  |  1.407  |  DISEASES
1038  |  CDR1  |  1.238  |  DISEASES
1041  |  CDSN  |  1.316  |  DISEASES
1183  |  CLCN4  |  2.303  |  DISEASES
1184  |  CLCN5  |  5.439  |  DISEASES
1188  |  CLCNKB  |  1.401  |  DISEASES
1471  |  CST3  |  2.064  |  DISEASES
1491  |  CTH  |  1.227  |  DISEASES
1497  |  CTNS  |  6.427  |  DISEASES
8029  |  CUBN  |  5.046  |  DISEASES
5167  |  ENPP1  |  1.004  |  DISEASES
8087  |  FXR1  |  1.786  |  DISEASES
2591  |  GALNT3  |  1.851  |  DISEASES
2638  |  GC  |  2.485  |  DISEASES
2878  |  GPX3  |  1.027  |  DISEASES
3633  |  INPP5B  |  2.374  |  DISEASES
56623  |  INPP5E  |  4.104  |  DISEASES
3758  |  KCNJ1  |  1.211  |  DISEASES
9365  |  KL  |  1.397  |  DISEASES
3831  |  KLC1  |  2.815  |  DISEASES
10724  |  MGEA5  |  2.4  |  DISEASES
4514  |  MT-CO3  |  1.107  |  DISEASES
4567  |  MT-TL1  |  1.748  |  DISEASES
4694  |  NDUFA1  |  1.81  |  DISEASES
137682  |  NDUFAF6  |  3.962  |  DISEASES
9520  |  NPEPPS  |  1.523  |  DISEASES
4952  |  OCRL  |  5.951  |  DISEASES
5962  |  RDX  |  1.072  |  DISEASES
391  |  RHOG  |  2.091  |  DISEASES
3921  |  RPSA  |  1.537  |  DISEASES
10670  |  RRAGA  |  2.618  |  DISEASES
64121  |  RRAGC  |  2.923  |  DISEASES
6557  |  SLC12A1  |  1.167  |  DISEASES
6559  |  SLC12A3  |  2.275  |  DISEASES
10786  |  SLC17A3  |  2.502  |  DISEASES
6575  |  SLC20A2  |  1.648  |  DISEASES
116085  |  SLC22A12  |  1.301  |  DISEASES
6582  |  SLC22A2  |  1.761  |  DISEASES
9356  |  SLC22A6  |  1.777  |  DISEASES
9376  |  SLC22A8  |  1.542  |  DISEASES
10861  |  SLC26A1  |  2.809  |  DISEASES
3177  |  SLC29A2  |  1.776  |  DISEASES
6514  |  SLC2A2  |  3.162  |  DISEASES
6569  |  SLC34A1  |  4.287  |  DISEASES
10568  |  SLC34A2  |  1.805  |  DISEASES
142680  |  SLC34A3  |  1.75  |  DISEASES
64116  |  SLC39A8  |  2.045  |  DISEASES
8671  |  SLC4A4  |  2.657  |  DISEASES
6524  |  SLC5A2  |  3.81  |  DISEASES
10250  |  SRRM1  |  2.044  |  DISEASES
6736  |  SRY  |  3.037  |  DISEASES
29110  |  TBK1  |  1.233  |  DISEASES
10732  |  TCFL5  |  1.327  |  DISEASES
7018  |  TF  |  1.505  |  DISEASES
219623  |  TMEM26  |  2.735  |  DISEASES
57393  |  TMEM27  |  2.24  |  DISEASES
26276  |  VPS33B  |  2.16  |  DISEASES
9213  |  XPR1  |  1.918  |  DISEASES
26137  |  ZBTB20  |  2.017  |  DISEASES
Locus(Waiting for update.)
Disease ID 942
Disease fanconi syndrome
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:51)
HP:0002749  |  Osteomalacia  |  7
HP:0009806  |  Nephrogenic diabetes insipidus  |  4
HP:0002748  |  Rickets  |  4
HP:0000873  |  Diabetes insipidus  |  4
HP:0000083  |  Renal insufficiency  |  3
HP:0012115  |  Liver inflammation  |  3
HP:0002148  |  Hypophosphataemia  |  3
HP:0003076  |  Glucosuria  |  3
HP:0200123  |  Chronic liver inflammation  |  3
HP:0001970  |  Interstitial nephritis  |  3
HP:0000123  |  Nephritis  |  3
HP:0006775  |  Multiple myeloma  |  3
HP:0002909  |  Generalized nonspecific aminoaciduria  |  2
HP:0002665  |  Lymphoma  |  2
HP:0003109  |  Hyperphosphaturia  |  2
HP:0003355  |  Aminoaciduria  |  2
HP:0000093  |  Proteinuria  |  2
HP:0000554  |  Uveitis  |  2
HP:0000114  |  Proximal tubular defect  |  1
HP:0002157  |  Azotaemia  |  1
HP:0000613  |  Extreme light sensitivity  |  1
HP:0002653  |  Bone pain  |  1
HP:0001919  |  Acute renal failure  |  1
HP:0003774  |  End-stage renal failure  |  1
HP:0003641  |  Hemoglobin in urine  |  1
HP:0000117  |  Decreased tubular maximum for phosphate reabsorption per glomerular filtration rate  |  1
HP:0001941  |  acidemia  |  1
HP:0001735  |  Acute pancreatitis  |  1
HP:0100512  |  Vitamin D deficiency  |  1
HP:0002150  |  Hypercalcinuria  |  1
HP:0000112  |  Nephropathy  |  1
HP:0100727  |  Histiocytosis  |  1
HP:0000103  |  Polyuria  |  1
HP:0001324  |  Muscular weakness  |  1
HP:0001909  |  Leukemia  |  1
HP:0012531  |  Pain  |  1
HP:0007099  |  Arnold Chiari type I malformation  |  1
HP:0002901  |  Hypocalcemia  |  1
HP:0005550  |  Chronic lymphatic leukemia  |  1
HP:0002090  |  Pneumonia  |  1
HP:0001508  |  Weight faltering  |  1
HP:0003126  |  Tubular proteinuria  |  1
HP:0004912  |  Hypophosphatemic rickets  |  1
HP:0000121  |  Nephrocalcinosis  |  1
HP:0005508  |  Waldenstrom macroglobulinemia  |  1
HP:0001995  |  Hyperchloremic acidosis  |  1
HP:0004818  |  Paroxysmal nocturnal hemoglobinuria  |  1
HP:0001733  |  Pancreatic inflammation  |  1
HP:0012189  |  Hodgkin disease  |  1
HP:0012622  |  Chronic kidney disease  |  1
HP:0001638  |  Cardiomyopathy  |  1
Disease ID 942
Disease fanconi syndrome
Manually Symptom
UMLS  | Name(Total Manually Symptoms:13)
C2700526  |  erythrocytosis
C1963154  |  renal failure
C1962972  |  proteinuria
C1000483  |  anemia
C0546837  |  esophageal cancer
C0151747  |  renal tubular dysfunction
C0035579  |  rickets
C0029442  |  osteomalacia
C0027726  |  nephrotic syndrome
C0026764  |  myeloma
C0026764  |  multiple myeloma
C0017927  |  hepatic glycogenosis
C0005944  |  metabolic bone disease
Text Mined Symptom
UMLS | Name | Sentences' Count(Total Symptoms:6)
C0029442  |  osteomalacia  |  7
C0035579  |  rickets  |  3
C0026764  |  multiple myeloma  |  3
C0033687  |  proteinuria  |  2
C0035078  |  renal failure  |  2
C0026764  |  myeloma  |  1
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:4)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs113994205118559311497CTNSumls:C2931187BeFreeHomozygosity for a nonsense mutation in CTNS (753G -->A), encoding a premature termination codon (PTC) at amino acid 138 (W138X), results in nephropathic cystinosis.0.4595835412002CTNS;LOC105371492173655305GA
rs113994205118559311497CTNSumls:C0015624BeFreeHomozygosity for a nonsense mutation in CTNS (753G -->A), encoding a premature termination codon (PTC) at amino acid 138 (W138X), results in nephropathic cystinosis.0.0024429772002CTNS;LOC105371492173655305GA
rs121908125118559311497CTNSumls:C0015624BeFreeHomozygosity for a nonsense mutation in CTNS (753G -->A), encoding a premature termination codon (PTC) at amino acid 138 (W138X), results in nephropathic cystinosis.0.0024429772002CTNS;LOC105371492173655304GA,C
rs121908125118559311497CTNSumls:C2931187BeFreeHomozygosity for a nonsense mutation in CTNS (753G -->A), encoding a premature termination codon (PTC) at amino acid 138 (W138X), results in nephropathic cystinosis.0.4595835412002CTNS;LOC105371492173655304GA,C
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Disease ID 942
Disease fanconi syndrome
Case(Waiting for update.)